E. Angelier, Recherches écologiques et biogéographiques sur la faune des sables submergés, pp.37-162, 1953.

C. V. Baxter and F. R. Hauer, ), Canadian Journal of Fisheries and Aquatic Sciences, vol.3, issue.106, pp.1470-1481, 2000.
DOI : 10.2307/2389612

C. Baxter, F. R. Hauer, and W. W. Woessner, Measuring Groundwater???Stream Water Exchange: New Techniques for Installing Minipiezometers and Estimating Hydraulic Conductivity, 132<0493:MGWENT>2.0.CO, pp.493-502, 2003.
DOI : 10.1111/j.1745-6584.2000.tb00228.x

C. Bou and R. Rouch, Un nouveau champ de recherches sur la faune aquatique souterraine. Comptes Rendus de l, Académie des Sciences, vol.265, pp.369-370, 1967.

A. J. Boulton, Parallels and contrasts in the effects of drought on stream macroinvertebrate assemblages, Freshwater Biology, vol.25, issue.7, pp.1173-1185, 2003.
DOI : 10.1002/(SICI)1099-1085(19990228)13:3<371::AID-HYP744>3.0.CO;2-C

A. Boulton, T. Datry, T. Kasahara, M. Mutz, and J. Stanford, Ecology and management of the hyporheic zone: stream???groundwater interactions of running waters and their floodplains, Journal of the North American Benthological Society, vol.29, issue.1, pp.26-40, 2010.
DOI : 10.1899/08-017.1

A. J. Boulton, M. ?. Dole?olivier, and P. Marmonier, Optimizing a sampling strategy for assessing hyporheic invertebrate biodiversity using the Bou-Rouch method: Within-site replication and sample volume, Archiv fur Hydrobiologie, vol.156, issue.4, pp.431-456, 2003.
DOI : 10.1127/0003-9136/2003/0156-0431

URL : https://hal.archives-ouvertes.fr/halsde-00154803

A. J. Boulton, M. ?. Dole?olivier, and P. Marmonier, Effects of sample volume and taxonomic resolution on assessment of hyporheic assemblage composition sampled using a Bou-Rouch pump, Archiv f??r Hydrobiologie, vol.159, issue.3, pp.327-355, 2004.
DOI : 10.1127/0003-9136/2004/0159-0327

URL : https://hal.archives-ouvertes.fr/halsde-00154730

A. J. Boulton, M. S. Harvey, and H. Proctor, Of spates and species: responses by interstitial water mites to simulated spates in a subtropical Australian river, Experimental and Applied Acarology, vol.34, issue.1/2, pp.149-169, 2004.
DOI : 10.1023/B:APPA.0000044445.30246.b2

A. J. Boulton and E. H. Stanley, Hyporheic processes during flooding and drying in a Sonoran desert stream. II. Faunal dynamics, Archiv für Hydrobiologie, vol.134, pp.27-52, 1995.

G. Bretschko, The sedimentfauna in the uppermost parts of the impoundment " Altenwörth " (Danube, stream km, 1992.

J. M. Buffington and D. Tonina, Hyporheic Exchange in Mountain Rivers II: Effects of Channel Morphology on Mechanics, Scales, and Rates of Exchange, Geography Compass, vol.34, issue.Suppl, pp.1038-1062, 2009.
DOI : 10.1007/978-1-4612-1652-0_2

C. Capderrey, T. Datry, C. Claret, and F. Malard, Invertebrate distribution across nested geomorphic features in braided-river landscapes, Freshwater Science, vol.32, issue.4, pp.1188-1204, 2013.
DOI : 10.1899/12-188.1

URL : https://hal.archives-ouvertes.fr/halsde-00958705

S. M. Clinton, N. B. Grimm, and S. G. Fisher, Response of a Hyporheic Invertebrate Assemblage to Drying Disturbance in a Desert Stream, Journal of the North American Benthological Society, vol.15, issue.4, pp.700-712, 1996.
DOI : 10.2307/1467817

M. Creuzé-des-châtelliers, Geomorphological processes and discontinuities in the macrodistribution of the interstitial fauna. A working hypothesis, Verhandlungen der Internationalen Vereinigung fuer theoretische und angewandte Limnologie, pp.1609-1612, 1991.
DOI : 10.1051/limn/1988019

C. N. Dahm and H. M. Valett, Hyporheic Zones, Methods in stream ecology, 1996.
DOI : 10.1016/B978-012332908-0.50008-5

A. Dai, Drought under global warming: a review, Wiley Interdisciplinary Reviews: Climate Change, vol.1, issue.1, pp.45-65, 2011.
DOI : 10.1002/wcc.25

URL : https://zenodo.org/record/1229380/files/article.pdf

D. L. Danielopol, The distribution of the fauna in the interstitial habitats of riverine sediments of the Danube and the Piesting (Austria), International Journal of Speleology, vol.8, issue.1/2, 1976.
DOI : 10.5038/1827-806X.8.1.3

M. ?. Dole?olivier, P. Marmonier, and M. Creuzé-des-châtelliers, Interstitial systems: Case studies ?10.1??the alluvial plains of the Rhône River, France, Groundwater Ecology, pp.313-346, 1994.

S. Dray and A. B. Dufour, The ade4 package: Implementing the duality diagram for ecologists, Journal of Statistical Software, vol.22, pp.1-20, 2007.
DOI : 10.18637/jss.v022.i04

URL : https://hal.archives-ouvertes.fr/hal-00434575

S. Fenoglio, T. Bo, M. Cucco, and G. Malacarne, Response of benthic invertebrate assemblages to varying drought conditions in the Po river (NW Italy), Italian Journal of Zoology, vol.22, issue.2, pp.191-201, 2007.
DOI : 10.1002/(SICI)1099-1085(19990228)13:3<387::AID-HYP745>3.0.CO;2-R

S. Gayraud, M. Philippe, and L. Maridet, The response of benthic macroinvertebrates to artificial disturbance: drift or vertical movement in the gravel bed of two Sub-Alpine streams?, Fundamental and Applied Limnology, vol.147, issue.4, pp.431-446, 2000.
DOI : 10.1127/archiv-hydrobiol/147/2000/431

D. R. Geist and D. D. Dauble, Redd Site Selection and Spawning Habitat Use by Fall Chinook Salmon: The Importance of Geomorphic Features in Large Rivers, Environmental Management, vol.22, issue.5, pp.655-669, 1998.
DOI : 10.1007/s002679900137

C. N. Gibbins, J. Grant, I. A. Malcolm, and C. Soulsby, Influence of groundwater chemistry on hyporheic invertebrate assemblages is revealed by fine-scale sampling, Fundamental and Applied Limnology / Archiv f??r Hydrobiologie, vol.187, issue.3, pp.207-2210787, 2016.
DOI : 10.1127/fal/2016/0787

J. Gibert, J. A. Stanford, M. ?. Dole?olivier, and J. V. Ward, Basic Attributes of Groundwater Ecosystems and Prospects for Research, Groundwater ecology, pp.7-40, 1994.
DOI : 10.1016/B978-0-08-050762-0.50008-5

K. Grashoff, M. Ehrhardt, and K. Kremling, Methods of seawater analysis, 1983.

L. H. Gunderson, Ecological Resilience???In Theory and Application, Annual Review of Ecology and Systematics, vol.31, issue.1, pp.425-439, 2000.
DOI : 10.1146/annurev.ecolsys.31.1.425

S. P. Hendricks, Microbial Ecology of the Hyporheic Zone: A Perspective Integrating Hydrology and Biology, Journal of the North American Benthological Society, vol.12, issue.1, pp.70-78, 1993.
DOI : 10.2307/1467687

J. R. Holomuzki and B. J. Biggs, Taxon-specific responses to high-flow disturbance in streams:implications for population persistence, Journal of the North American Benthological Society, vol.19, issue.4, pp.670-679, 2000.
DOI : 10.2307/1468125

. Idees?eaux, Suivi de l'influence d'un prélèvement dans la Drôme et sa nappe d'accompagnement ??Simulations par modélisation mathématique, 2011.

A. B. James, Z. S. Dewson, and R. G. Death, Do stream macroinvertebrates use instream refugia in response to severe short-term flow reduction in New Zealand streams?, Freshwater Biology, vol.35, issue.7, pp.1316-1334, 2008.
DOI : 10.1029/TR035i006p00951

A. B. James, Z. S. Dewson, and R. G. Death, The effect of experimental flow reductions on macroinvertebrate drift in natural and streamside channels. River Research and Applications, pp.22-35, 2008.

R. Kawanishi, M. Inoue, R. Dohi, A. Fujii, and Y. Miyake, The role of the hyporheic zone for a benthic fish in an intermittent river: a refuge, not a graveyard, Aquatic Sciences, vol.4, issue.3, p.425, 2013.
DOI : 10.1111/j.1365-2427.1974.tb00094.x

J. Kelso, Macroinvertebrate communities and their use of refuge in intermittent and perennial streams, pp.1-99, 2012.

P. S. Lake, Ecological effects of perturbation by drought in flowing waters, Freshwater Biology, vol.14, issue.7, pp.1161-1172, 2003.
DOI : 10.1007/BF02394709

URL : http://onlinelibrary.wiley.com/doi/10.1046/j.1365-2427.2003.01086.x/pdf

J. Lancaster and L. R. Belyea, Nested Hierarchies and Scale-Dependence of Mechanisms of Flow Refugium Use, Journal of the North American Benthological Society, vol.16, issue.1, pp.221-238, 1997.
DOI : 10.2307/1468253

B. Lehner, P. Döll, J. Alcamo, T. Henrichs, and F. Kaspar, Estimating the Impact of Global Change on Flood and Drought Risks in Europe: A Continental, Integrated Analysis, Climatic Change, vol.23, issue.2, pp.273-299, 2006.
DOI : 10.2305/IUCN.CH.2003.WANI.1.en

F. Malard, D. Ferreira, S. Dolédec, and J. V. Ward, Influence of groundwater upwelling on the distribution of the hyporheos in a headwater river flood plain, Archiv f??r Hydrobiologie, vol.157, issue.1, pp.89-116, 2003.
DOI : 10.1127/0003-9136/2003/0157-0089

URL : https://hal.archives-ouvertes.fr/halsde-00154787

F. Malard, K. Tockner, M. ?. Dole?olivier, and J. V. Ward, A landscape perspective of surface-subsurface hydrological exchanges in river corridors, Freshwater Biology, vol.47, issue.4, pp.621-640, 2002.
DOI : 10.1029/97WR03285

F. Malard, K. Tockner, and J. V. Ward, Shifting dominance of subcatchment water sources and flow paths in a glacial floodplain, pp.135-150, 1999.
DOI : 10.2307/1552602

F. Malard, J. V. Ward, and C. T. Robinson, An expanded perspective of the hyporheic zone, Verhandlungen der Internationalen Vereinigung für Theoretische und Angewandte Limnologie, pp.431-437, 2000.
DOI : 10.1080/03680770.1998.11901268

I. A. Malcolm, A. F. Youngson, and C. Soulsby, Survival of salmonid eggs in a degraded gravel-bed stream: effects of groundwater-surface water interactions, River Research and Applications, vol.59, issue.4, pp.303-316, 2003.
DOI : 10.1139/z81-092

P. Marmonier and M. Creuzé-des-châtelliers, Effects of spates on interstitial assemblages of the Rh??ne River. Importance of spatial heterogeneity, Hydrobiologia, vol.27, issue.65, pp.243-251, 1991.
DOI : 10.1007/BF00034683

P. Marmonier and M. ?. Dole, Les Amphipodes des sédiments d'un bras court?circuité du Rhône : logique de répartition et réaction aux crues, pp.461-486, 1986.

M. Mestrov and R. Lattinger?penko, Investigation of the mutual influence between a polluted river and its hyporheic, International Journal of Speleology, vol.11, issue.1/2, pp.159-171, 1981.
DOI : 10.5038/1827-806X.11.1.15

J. Oksanen, F. G. Blanchet, R. Kindt, P. Legendre, P. R. Minchin et al., Vegan: Community ecology package, R package version 2, 2012.

M. A. Palmer, A. E. Bely, and K. E. Berg, Response of invertebrates to lotic disturbance: a test of the hyporheic refuge hypothesis, Oecologia, vol.4, issue.2, pp.182-194, 1992.
DOI : 10.1111/j.1365-2427.1974.tb00094.x

G. C. Poole, S. J. O-'daniel, K. L. Jones, W. W. Woessner, E. S. Bernhardt et al., Hydrologic spiralling: the role of multiple interactive flow paths in stream ecosystems, River Research and Applications, vol.43, issue.7, pp.1018-1031, 2008.
DOI : 10.1029/2005WR004816

R. Stubbington, The hyporheic zone as an invertebrate refuge: A review of variability in space, time, taxa and behaviour. Marine and Freshwater Research Available at: https, pp.293-311, 2012.

R. Stubbington, J. ?. Hoggan, and P. J. Wood, Characterization of the density and body size of a Gammarus pulex (Crustacea: Amphipoda) population in subsurface sediments reflects the sampling technique used, Hydrobiologia, vol.176, issue.10, pp.293-303, 2017.
DOI : 10.1127/1863-9135/2010/0176-0377

R. Stubbington, P. J. Wood, and A. J. Boulton, Low flow controls on benthic and hyporheic macroinvertebrate assemblages during supra-seasonal drought, Hydrological Processes, vol.61, issue.15, pp.2252-2263, 2009.
DOI : 10.1127/archiv-hydrobiol/149/2000/213

URL : http://irep.ntu.ac.uk/id/eprint/17733/1/205437_7593%20Stubbington%20Preprint.pdf

R. Stubbington, P. J. Wood, I. Reid, and J. Gunn, Benthic and hyporheic invertebrate community responses to seasonal flow recession in a groundwater-dominated stream, Ecohydrology, vol.545, issue.4, pp.500-511, 2011.
DOI : 10.1007/s10750-005-2213-y

URL : http://irep.ntu.ac.uk/id/eprint/5968/1/205434_7590%20Stubbington%20Postprint.pdf

T. E. Swanson and M. B. Cardenas, Diel heat transport within the hyporheic zone of a pool-riffle-pool sequence of a losing stream and evaluation of models for fluid flux estimation using heat, Limnology and Oceanography, vol.55, issue.4, pp.1741-1754, 2010.
DOI : 10.4319/lo.2010.55.4.1741a

K. Tockner, F. Malard, P. Burgherr, C. T. Robinson, U. Uehlinger et al., Physico?chemical characterization of channel types in a glacial floodplain ecosystem (Val Roseg, Switzerland) Archiv für Hydrobiologie, pp.433-463433, 1997.
DOI : 10.1127/archiv-hydrobiol/140/1997/433

D. Tonina and J. M. Buffington, Hyporheic exchange in gravel bed rivers with pool-riffle morphology: Laboratory experiments and three-dimensional modeling, Water Resources Research, vol.39, issue.7, 1421.
DOI : 10.1029/2002WR001344

URL : http://onlinelibrary.wiley.com/doi/10.1029/2005WR004328/pdf

A. N. Vadher, R. Stubbington, and P. J. Wood, Fine sediment reduces vertical migrations of Gammarus pulex (Crustacea: Amphipoda) in response to surface water loss, Hydrobiologia, vol.62, issue.1, pp.61-71, 2015.
DOI : 10.1071/MF11060

URL : https://link.springer.com/content/pdf/10.1007%2Fs10750-015-2193-5.pdf

V. Vorste, R. Malard, F. Datry, and T. , Is drift the primary process promoting the resilience of river invertebrate communities? A manipulative field experiment in an intermittent alluvial river, Freshwater Biology, vol.27, issue.8, pp.1276-1292, 2016.
DOI : 10.2307/3543905

URL : https://hal.archives-ouvertes.fr/hal-01714348

V. Vorste, R. Mermillod?blondin, F. Hervant, F. Mons, R. Forcellini et al., and alters ecosystem function, Ecohydrology, vol.96, issue.24, pp.1177-1186, 2016.
DOI : 10.1073/pnas.96.4.1463

URL : https://hal.archives-ouvertes.fr/hal-01493980