A. J. Andersson, N. R. Bates, and F. T. Mackenzie, Dissolution of Carbonate Sediments Under Rising pCO2 and Ocean Acidification: Observations from Devil???s Hole, Bermuda, Aquatic Geochemistry, vol.3, issue.8???9, pp.237-264, 2007.
DOI : 10.1007/s10498-007-9018-8

A. J. Andersson and F. T. Mackenzie, Revisiting four scientific debates in ocean acidification research, Biogeosciences, vol.9, issue.3, pp.893-905, 2012.
DOI : 10.5194/bg-9-893-2012

A. J. Andersson, F. T. Mackenzie, and A. Lerman, Coastal ocean and carbonate systems in the high CO2 world of the Anthropocene, American Journal of Science, vol.305, issue.9, pp.875-918, 2005.
DOI : 10.2475/ajs.305.9.875

K. R. Anthony, D. I. Kline, G. Diaz-pulido, S. Dove, and O. Hoegh-guldberg, Ocean acidification causes bleaching and productivity loss in coral reef builders, Proceedings of the National Academy of Sciences, vol.105, issue.45, pp.17442-17446, 2008.
DOI : 10.1073/pnas.0804478105

J. A. Berge, B. Bjerkeng, O. Pettersen, M. T. Schaanning, and S. Oxnevad, Effects of increased sea water concentrations of CO2 on growth of the bivalve Mytilus edulis L., Chemosphere, vol.62, issue.4, pp.681-687, 2006.
DOI : 10.1016/j.chemosphere.2005.04.111

K. Bonham, Growth Rate of Giant Clam Tridacna gigas at Bikini Atoll as Revealed by Radioautography, Science, vol.149, issue.3681, pp.300-302, 1965.
DOI : 10.1126/science.149.3681.300

K. Caldeira and M. E. Wickett, Ocean model predictions of chemistry changes from carbon dioxide emissions to the atmosphere and ocean, Journal of Geophysical Research, vol.15, issue.C6, pp.1-12, 2005.
DOI : 10.1029/2004JC002671

M. Carreiro-silva, T. R. Mcclanahan, and W. E. Kiene, The role of inorganic nutrients and herbivory in controlling microbioerosion of carbonate substratum, Coral Reefs, vol.24, issue.2, pp.214-221, 2005.
DOI : 10.1007/s00338-004-0445-3

V. Chazottes, T. Le-campion-alsumard, and M. Peyrot-clausade, Bioerosion rates on coral reefs: interactions between macroborers, microborers and grazers (Moorea, French Polynesia), Palaeogeography, Palaeoclimatology, Palaeoecology, vol.113, issue.2-4, pp.189-198, 1995.
DOI : 10.1016/0031-0182(95)00043-L

V. Chazottes, T. Le-campion-alsumard, M. Peyrot-clausade, and P. Cuet, The effects of eutrophication-related alterations to coral reef communities on agents and rates of bioerosion (Reunion Island, Indian Ocean), Coral Reefs, vol.21, pp.375-390, 2002.
URL : https://hal.archives-ouvertes.fr/hal-01368987

M. Cigliano, M. C. Gambi, R. Rodolfo-metalpa, F. P. Patti, and J. M. Hall-spencer, Effects of ocean acidification on invertebrate settlement at volcanic CO2 vents, Marine Biology, vol.275, issue.6, pp.2489-2502, 2010.
DOI : 10.1007/s00227-010-1513-6

T. F. Cooper, G. De-'ath, K. E. Fabricius, and J. M. Lough, Declining coral calcification in massive Porites in two nearshore regions of the northern Great Barrier Reef, Global Change Biology, vol.51, issue.3, pp.529-538, 2008.
DOI : 10.1016/S0022-0981(01)00379-3

E. D. Crook, D. Potts, M. Rebolledo-vieyra, L. Hernandez, and A. Paytan, Calcifying coral abundance near low-pH springs: implications for future ocean acidification, Coral Reefs, vol.29, issue.1, pp.239-245, 2011.
DOI : 10.1007/s00338-011-0839-y

A. H. Cutler, Taphonomic implications of shell surface textures in Bahia la Choya, northern Gulf of California, Palaeogeography, Palaeoclimatology, Palaeoecology, vol.114, issue.2-4, pp.219-240, 1995.
DOI : 10.1016/0031-0182(94)00078-M

P. R. Dando, D. Stüben, and S. P. Varnavas, Hydrothermalism in the Mediterranean Sea, Progress in Oceanography, vol.44, issue.1-3, pp.333-367, 1999.
DOI : 10.1016/S0079-6611(99)00032-4

S. C. Doney, V. J. Fabry, R. A. Feely, and J. A. Kleypas, Problem, Annual Review of Marine Science, vol.1, issue.1, 2009.
DOI : 10.1146/annurev.marine.010908.163834

D. Ezgeta-balic, M. Peharda, C. A. Richardson, M. Kuzmanic, N. Vrgoc et al., Age, growth, and population structure of the smooth clam Callista chione in the eastern Adriatic Sea, Helgoland Marine Research, vol.21, issue.1, pp.457-465, 2011.
DOI : 10.1007/s10152-010-0235-y

F. Garcia-pichel, Plausible mechanisms for the boring on carbonates by microbial phototrophs, Sedimentary Geology, vol.185, issue.3-4, pp.205-213, 2006.
DOI : 10.1016/j.sedgeo.2005.12.013

F. Garcia-pichel, E. Ramírez-reinat, and Q. Gao, Microbial excavation of solid carbonates powered by P-type ATPase-mediated transcellular Ca2+ transport, Proceedings of the National Academy of Sciences, vol.107, issue.50, pp.21749-21754, 2010.
DOI : 10.1073/pnas.1011884108

F. Gazeau, C. Quiblier, J. M. Jansen, J. P. Gattuso, J. J. Middelburg et al., Impact of elevated CO 2 on shellfish calcification, Geophysical Research Letters, vol.34, pp.1-5, 2007.

M. Gektidis, Development of microbial euendolithic communities: The influence of light and time, Bulletin of the Geological Society of Denmark, vol.45, pp.147-150, 1999.

S. Golubic, I. Friedmann, and J. Schneider, The lithobiontic ecological niche, with special reference to microorganisms, Journal of Sedimentary Petrology, vol.51, pp.475-478, 1981.

J. M. Guinotte and V. J. Fabry, Ocean Acidification and Its Potential Effects on Marine Ecosystems, Annals of the New York Academy of Sciences, vol.15, issue.1, pp.320-342, 2008.
DOI : 10.1196/annals.1439.013
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.316.7909

J. M. Hall-spencer, R. Rodolfo-metalpa, S. Martin, E. Ransome, M. Fine et al., Volcanic carbon dioxide vents show ecosystem effects of ocean acidification, Nature, vol.3, issue.7200, pp.96-99, 2008.
DOI : 10.1038/nature07051

J. M. Hall-spencer and R. Rodolpho-metalpa, Using scientific diving to investigation the long-term effects of ocean acidification at CO 2 vents, Freiberg Online Geology, vol.22, pp.72-76, 2009.

O. Hoegh-guldberg, P. J. Mumby, A. J. Hooten, R. S. Steneck, P. Greenfield et al., Coral Reefs Under Rapid Climate Change and Ocean Acidification, Science, vol.318, issue.5857, pp.1737-1742, 2007.
DOI : 10.1126/science.1152509

J. A. Kleypas, R. W. Buddemeier, D. Archer, J. P. Gattuso, C. Langdon et al., Geochemical Consequences of Increased Atmospheric Carbon Dioxide on Coral Reefs, Science, vol.284, issue.5411, pp.118-120, 1999.
DOI : 10.1126/science.284.5411.118

J. A. Kleypas, R. A. Feely, V. J. Frabry, C. Langdon, C. L. Sabine et al., Impacts of ocean acidification on coral reefs and other marine calcifiers: A guide for future research, pp.1-96, 2006.

I. B. Kuffner, A. J. Andersson, P. L. Jokiel, K. S. Rodgers, and F. T. Mackenzie, Decreased abundance of crustose coralline algae due to ocean acidification, Nature Geoscience, vol.106, issue.2, pp.114-117, 2008.
DOI : 10.1038/ngeo100

H. Kurihara, T. Asai, S. Kato, and A. Ishimatsu, Effects of elevated pCO2 on early development in the mussel Mytilus galloprovincialis, Aquatic Biology, vol.4, pp.225-233, 2008.
DOI : 10.3354/ab00109

C. Langdon, T. Takahashi, C. Sweeney, D. Chipman, and J. Goddard, Effect of calcium carbonate saturation state on the calcification rate of an experimental coral reef, Global Biogeochemical Cycles, vol.2, issue.2, pp.639-654, 2000.
DOI : 10.1029/1999GB001195

G. Langer, M. Geisen, K. H. Baumann, J. Klas, U. Riebesell et al., Species-specific responses of calcifying algae to changing seawater carbonate chemistry, Geochemistry, Geophysics, Geosystems, vol.272, issue.3, pp.1-12, 2006.
DOI : 10.1029/2005GC001227

L. Campion-alsumard, T. , S. Golubic, and P. A. Hutchings, Microbial endoliths in skeletons of live and dead corals: Porites lobata (Moorea, French Polynesia), Marine Ecology Progress Series, vol.117, pp.149-157, 1995.
DOI : 10.3354/meps117149

H. Lescinsky and B. A. Hoedt, Results of long-term bioerosion study: Belize patch reefs, Proceedings of the 11th International Coral Reef Symposium, pp.26-30, 2008.

C. Lombardi, M. C. Gambi, C. Vasapollo, P. Taylor, and S. Cocito, Skeletal alterations and polymorphism in a Mediterranean bryozoan at natural CO2 vents, Zoomorphology, vol.412, issue.1528, pp.135-145, 2011.
DOI : 10.1007/s00435-011-0127-y

M. Che, L. , T. Le-campion-alsumard, C. Payri, S. Golubic et al., Biodegradation of shells of the black pearl oyster, Pinctada margaritifera var. cumingii, by microborers and sponges of French Polynesia, Marine Biology, vol.126, pp.509-519, 1996.

S. Martin, R. Rodolfo-metalpa, E. Ransome, S. Rowley, M. C. Buia et al., Effects of naturally acidified seawater on seagrass calcareous epibionts, Biology Letters, vol.3, issue.5682, pp.689-692, 2008.
DOI : 10.1126/science.1097403

T. Mermexgroup, Marine ecosystems responses to climatic and anthropogenic forcings in the Mediterranean, Progress in Oceanography, vol.91, pp.97-166, 2011.

J. C. Orr, V. J. Fabry, O. Aumont, L. Bopp, S. C. Doney et al., Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms, Yamanaka, and A. Yool. 2005. Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms, pp.681-686
DOI : 10.1038/nature04095
URL : https://hal.archives-ouvertes.fr/hal-00124807

C. T. Perry, Grain susceptibility to the effects of microboring: implications for the preservation of skeletal carbonates, Sedimentology, vol.54, issue.1, pp.39-51, 1998.
DOI : 10.1046/j.1365-3091.1998.00134.x

C. T. Perry, Factors Controlling Sediment Preservation on a North Jamaican Fringing Reef: A Process-Based Approach to Microfacies Analysis, Journal of Sedimentary Research, vol.70, issue.3, pp.633-648, 2000.
DOI : 10.1306/2DC4092D-0E47-11D7-8643000102C1865D

S. Reynaud, N. Leclercq, S. Romaine-lioud, C. Ferrier-pagés, and J. P. Gattuso, Interacting effects of CO2 partial pressure and temperature on photosynthesis and calcification in a scleractinian coral, Global Change Biology, vol.115, issue.11, pp.1660-1668, 2003.
DOI : 10.1126/science.1075312

U. Riebesell, I. Zondervan, B. Rost, P. D. Tortell, R. E. Zeebe et al., Reduced calcificationof marine plankton in response to increased atmospheric CO 2, Nature, vol.407, issue.6802, pp.364-367, 2000.
DOI : 10.1038/35030078

R. Rodolfo-metalpa, F. Houlbreque, E. Tambutte, F. Boisson, C. Baggini et al., Coral and mollusc resistance to ocean acidification adversely affected by warming, Nature Climate Change, vol.122, issue.6, pp.308-312, 2011.
DOI : 10.1038/nclimate1200

C. L. Sabine, R. A. Feely, N. Gruber, R. M. Key, K. Lee et al., The Oceanic Sink for Anthropogenic CO2, Science, vol.305, issue.5682, pp.367-371, 2004.
DOI : 10.1126/science.1097403

A. Santos and E. Mayoral, Bioerosion versus colonisation on Bivalvia: A case study from the Upper Miocene of Cacela (southeast Portugal), Geobios, vol.41, issue.1, pp.43-59, 2008.
DOI : 10.1016/j.geobios.2007.01.009

E. C. Shaw, B. I. Mcneil, and B. Tilbrook, Impacts of ocean acidification in naturally variable coral reef flat ecosystems, Journal of Geophysical Research: Oceans, vol.104, issue.1-2, pp.1-14, 2012.
DOI : 10.1016/j.marchem.2006.12.008

J. Silverman, L. Lazar, K. Cao, J. Caldeira, and . Erez, Coral reefs may start dissolving when atmospheric CO 2 doubles, Geophysical Research Letters, vol.36, pp.1-5, 2009.

D. Tedesco, Chemical and isotopic investigations of fumarolic gases from Ischia island (southern Italy): Evidences of magmatic and crustal contribution, Journal of Volcanology and Geothermal Research, vol.74, issue.3-4, pp.233-242, 1996.
DOI : 10.1016/S0377-0273(96)00030-3

F. Touratier and C. Goyet, Impact of the Eastern Mediterranean Transient on the distribution of anthropogenic CO2 and first estimate of acidification for the Mediterranean Sea, Deep Sea Research Part I: Oceanographic Research Papers, vol.58, issue.1, pp.1-15, 2011.
DOI : 10.1016/j.dsr.2010.10.002

A. Tribollet, The boring microflora in modern coral reef ecosystems : a review of its roles. Pages 67-94 in, 2008.

A. Tribollet, Dissolution of dead corals by euendolithic microorganisms across the northern Great Barrier Reef (Australia), Microb Ecol, vol.55, pp.569-580, 2008.

A. Tribollet, M. J. Atkinson, and C. Langdon, Effects of elevated pCO 2 on epilithic and endolithic metabolism of reef carbonates, Global Change Biology, vol.12, pp.2200-2208, 2006.

A. Tribollet, G. Decherf, P. A. Hutchings, and M. Peyrot-clausade, Large-scale spatial variability in bioerosion of experimental coral substrates on the Great Barrier Reef (Australia): importance of microborers, Coral Reefs, vol.21, pp.424-432, 2002.

A. Tribollet, C. Godinot, M. J. Atkinson, and C. Langdon, Effects of elevated pCO 2 on dissolution of coral carbonates by microbial euendoliths, Global Biogeochemical cycles, vol.23, pp.1-7, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00937269

A. Tribollet and S. Golubic, Cross-shelf differences in the pattern and pace of bioerosion of experimental carbonate substrates exposed for 3??years on the northern Great Barrier Reef, Australia, Coral Reefs, vol.24, issue.3, pp.422-434, 2005.
DOI : 10.1007/s00338-005-0003-7
URL : https://hal.archives-ouvertes.fr/hal-00937276

A. Tribollet and S. Golubic, Reef bioerosion : agents and processes Coral reefs: an ecosystem in transition, pp.435-449, 2011.

K. Vogel, M. Gektidis, S. Golubic, W. E. Kiene, and G. Radtke, Experimental studies on microbial bioerosion at Lee Stocking Island, Bahamas and One Tree Island, Great Barrier Reef, Australia: implications for paleoecological reconstructions, Lethaia, vol.33, pp.190-204, 2000.

M. Wisshak, Two new dwarf Entobia ichnospecies in a diverse aphotic ichnocoenosis (Pleistocene/Rhodes, Greece). Pages 213-233 in, 2008.

M. Wisshak and J. David, The new Ichnogenus Flagrichnus ?A paleoenvironmental indicator for cold-water settings? Ichnos, An International Journal for Plant and Animal Traces, vol.13, pp.135-145, 2006.

M. Wisshak, M. Gektidis, A. Freiwald, and T. Lundalv, Bioerosion along a bathymetric gradient in a cold-temperate setting (Kosterfjord, SW Sweden): an experimental study, Facies, vol.26, issue.1-4, pp.93-117, 2005.
DOI : 10.1007/s10347-005-0009-1

M. Wisshak, A. Tribollet, S. Golubic, J. Jakobsen, and A. Freiwald, Temperate bioerosion: ichnodiversity and biodiversity from intertidal to bathyal depths (Azores), Geobiology, vol.26, issue.6, pp.492-520, 2011.
DOI : 10.1111/j.1472-4669.2011.00299.x