I. S. Arlyza, K. Shen, J. Durand, and P. Borsa, Mitochondrial Haplotypes Indicate Parapatric-like Phylogeographic Structure in Blue-Spotted Maskray (Neotrygon kuhlii) from the Coral Triangle Region, Journal of Heredity, vol.14, issue.5, pp.725-733, 2013.
DOI : 10.1007/s10641-011-9897-9

URL : https://hal.archives-ouvertes.fr/ird-00853606

I. S. Arlyza, K. Shen, D. D. Solihin, D. Soedharma, P. Berrebi et al., Species boundaries in the Himantura uarnak species complex (Myliobatiformes: Dasyatidae), Molecular Phylogenetics and Evolution, vol.66, issue.1, pp.429-435, 2013.
DOI : 10.1016/j.ympev.2012.09.023

URL : https://hal.archives-ouvertes.fr/ird-00758049

N. C. Aschliman, M. Nishida, M. Miya, J. G. Inoue, K. M. Rosana et al., Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea), Molecular Phylogenetics and Evolution, vol.63, issue.1, pp.28-42, 2012.
DOI : 10.1016/j.ympev.2011.12.012

C. C. Baldwin, C. I. Castillo, L. A. Weigt, and B. C. Victor, Figure 9 from: Weigt L, Victor B, Castillo C (2011) Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species. ZooKeys 79: 21-72. https://doi.org/10.3897/zookeys.79.1045, ZooKeys, vol.9, issue.3, pp.21-72, 2011.
DOI : 10.3897/zookeys.79.1045.figure9

M. L. Bauchot, Les poissons décrits et figurés dans les manuscrits de Quoy au cours du voyage de l " Astrolabe (1826-1829), Cybium, vol.18, issue.1, pp.3-101, 1994.

D. Bickford, D. J. Lohman, N. S. Sodhi, P. Ng, R. Meier et al., Cryptic species as a window on diversity and conservation, Trends in Ecology & Evolution, vol.22, issue.3, pp.148-155, 2007.
DOI : 10.1016/j.tree.2006.11.004

P. Borsa, Comments onAnnotated checklist of the living sharks, batoids and chimaeras (Chondrichthyes) of the world, with a focus on biogeographical diversity" (Weigmann, 2016), Journal of Fish Biology, 2017.

P. Borsa, I. S. Arlyza, W. Chen, J. Durand, M. G. Meekan et al., Resurrection of New Caledonian maskray Neotrygon trigonoides (Myliobatoidei: Dasyatidae) from synonymy with N.??kuhlii, based on cytochrome-oxidase I gene sequences and spotting patterns, Comptes Rendus Biologies, vol.336, issue.4, pp.221-232
DOI : 10.1016/j.crvi.2013.05.005

URL : https://hal.archives-ouvertes.fr/ird-00847459

P. Borsa and P. Béarez, Notes on the origin of Müller and Henle " s illustration and type material of the bluespotted maskray Neotrygon kuhlii (Myliobatoidei: Dasyatidae), Cybium, vol.40, pp.255-258, 2016.

P. Borsa, P. Béarez, S. Paijo, and W. Chen, Gymnocranius superciliosus and Gymnocranius satoi, two new large-eye breams (Sparoidea: Lethrinidae) from the Coral Sea and adjacent regions, Comptes Rendus Biologies, vol.336, issue.4, pp.233-240
DOI : 10.1016/j.crvi.2013.06.003

URL : https://hal.archives-ouvertes.fr/ird-00847880

P. Borsa, J. Durand, W. Chen, N. Hubert, D. Muths et al., Comparative phylogeography of the western Indian Ocean reef fauna, Acta Oecologica, vol.72, pp.72-86, 2016.
DOI : 10.1016/j.actao.2015.10.009

URL : https://hal.archives-ouvertes.fr/ird-01278855

P. Borsa, J. Durand, K. Shen, I. S. Arlyza, D. D. Solihin et al., Himantura tutul sp. nov. (Myliobatoidei: Dasyatidae), a new ocellated whipray from the tropical Indo-West Pacific, described from its cytochrome-oxidase I gene sequence, Comptes Rendus Biologies, vol.336, issue.2, pp.82-92, 2013.
DOI : 10.1016/j.crvi.2013.01.004

URL : https://hal.archives-ouvertes.fr/ird-00820396

P. Borsa, C. Fauvelot, J. Tiavouane, D. Grulois, C. Wabnitz et al., Distribution of Noah???s giant clam, Tridacna noae, Marine Biodiversity, vol.11, issue.2, pp.339-344, 2015.
DOI : 10.3755/galaxea.11.91

URL : https://hal.archives-ouvertes.fr/ird-01186455

P. Borsa, A. Sembiring, C. Fauvelot, and W. Chen, Resurrection of Indian Ocean humbug damselfish, Dascyllus abudafur (Forssk??l) from synonymy with its Pacific Ocean sibling, Dascyllus aruanus (L.), Comptes Rendus Biologies, vol.337, issue.12, pp.709-716, 2014.
DOI : 10.1016/j.crvi.2014.09.001

P. Borsa, K. Shen, I. S. Arlyza, and T. B. Hoareau, Multiple cryptic species in the blue-spotted maskray (Myliobatoidei: Dasyatidae: Neotrygon spp.): An update, Comptes Rendus Biologies, vol.339, issue.9-10, pp.417-426
DOI : 10.1016/j.crvi.2016.07.004

URL : https://hal.archives-ouvertes.fr/ird-01372912

A. Z. Brower, ??? (Lepidoptera: Hesperiidae: Eudaminae) with DNA-based diagnoses, Systematics and Biodiversity, vol.16, issue.4, pp.485-491, 2010.
DOI : 10.1080/10635150802032982

C. M. Bull, Ecology of Parapatric Distributions, Annual Review of Ecology and Systematics, vol.22, issue.1, pp.19-36, 1991.
DOI : 10.1146/annurev.es.22.110191.000315

F. Castelnau and . De, Contribution to the ichthyology of Australia, Proceedings of the Zoological and Acclimatisation Society of Victoria, pp.37-158, 1873.

F. Cerutti-pereyra, M. G. Meekan, W. N. , O. Shea, O. Bradshaw et al., Identification of Rays through DNA Barcoding: An Application for Ecologists, PLoS ONE, vol.23, issue.6, p.36479, 2012.
DOI : 10.1371/journal.pone.0036479.s003

X. Chen, D. Xiang, J. Q. Yu, W. Y. Ding, and S. Zhang, (Myliobatiformes: Dasyatidae), Mitochondrial DNA, vol.70, issue.6, pp.429-430, 2014.
DOI : 10.1111/j.1095-8649.2007.01458.x

L. G. Cook, R. D. Edwards, M. D. Crisp, and N. B. Hardy, Need morphology always be required for new species descriptions?, Invertebrate Systematics, vol.24, issue.3, pp.322-326, 2010.
DOI : 10.1071/IS10011

M. T. Craig and P. A. Hastings, A molecular phylogeny of the groupers of the subfamily Epinephelinae (Serranidae) with a revised classification of the Epinephelini, Ichthyological Research, vol.52, issue.1888, pp.1-17, 2007.
DOI : 10.1080/00222935408651813

J. Dumont-d-"-urville, Atlas hydrographique du voyage de découvertes exécuté sur la corvette l, Astrolabe. J. Tastu, vol.45

J. Durand and P. Borsa, Mitochondrial phylogeny of grey mullets (Acanthopterygii: Mugilidae) suggests high proportion of cryptic species, Comptes Rendus Biologies, vol.338, issue.4, pp.266-277, 2015.
DOI : 10.1016/j.crvi.2015.01.007

URL : https://hal.archives-ouvertes.fr/ird-01144054

J. Durand, W. Chen, K. Shen, C. Fu, and P. Borsa, Genus-level taxonomic changes implied by the mitochondrial phylogeny of grey mullets (Teleostei: Mugilidae), Comptes Rendus Biologies, vol.335, issue.10-11, pp.687-697, 2012.
DOI : 10.1016/j.crvi.2012.09.005

URL : https://hal.archives-ouvertes.fr/ird-00759075

. Fahmi, W. T. White, and I. P. Jacobsen, , 2015.

S. Garman, Notes and descriptions taken from selachians in the U. S. National Museum, Proceedings of the United States National Museum, pp.39-44
DOI : 10.5479/si.00963801.482.39

, International code of zoological nomenclature International Trust of Zoological Nomenclature, London, 306 p. International Commission on Zoological Nomenclature 21 and 78 of the International Code of Zoological Nomenclature to expand and refine methods of publication, International Commission on Zoological Nomenclature, pp.161-169, 1999.

D. S. Jordan, A manual of the vertebrate animals of the northern United States, including the district north and east of the Ozark mountains, south of the Laurentian hills, north of the southern boundary of Virginia, and east of the Missouri river, inclusive of marine species. Fifth edition, entirely rewritten and much enlarged. A. C. McClurg and company

K. M. Jörger and M. Schrödl, How to describe a cryptic species? Practical challenges of molecular taxonomy, Frontiers in Zoology, vol.10, issue.1, p.59, 2013.
DOI : 10.1093/sysbio/syp006

N. Knowlton, Sibling Species in the Sea, Annual Review of Ecology and Systematics, vol.24, issue.1, pp.189-216, 1993.
DOI : 10.1146/annurev.es.24.110193.001201

F. Krishnamurthy, A critical review on the utility of DNA barcoding in biodiversity conservation, Biodiversity and Conservation, vol.6, issue.10, pp.1901-1919, 2012.
DOI : 10.1371/journal.pone.0026619

P. R. Last, W. T. White, J. N. Caira, . Dharmadi, . Fahmi et al., Sharks and rays of Borneo. CSIRO, Collingwood (Victoria), 2010.

D. Steinke, J. R. Gomon, M. F. Johnson, J. W. Larson, H. K. Lucanus et al., Supplementary material 3 from: Steinke D, deWaard J, Gomon M, Johnson J, Larson H, Lucanus O, Moore G, Reader S, Ward R (2017) DNA barcoding the fishes of Lizard Island (Great Barrier Reef). Biodiversity Data Journal 5: e12409. https://doi.org/10.3897/BDJ.5.e12409, Biodiversity Data Journal, vol.12, p.12409, 2017.
DOI : 10.3897/BDJ.5.e12409.suppl3

K. Tamura, Estimation of the number of nucleotide substitutions when there are strong transitiontransversion and G + C-content biases, Molecular Biology and Evolution, vol.9, pp.678-687, 1992.

K. Tamura, G. Stecher, D. Peterson, A. Filipski, and S. Kumar, MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0, Molecular Biology and Evolution, vol.87, issue.12, pp.2725-2729, 2013.
DOI : 10.1128/JVI.02478-12

D. Tautz, P. Arctander, A. Minelli, R. H. Thomas, and A. Vogler, A plea for DNA taxonomy, Trends in Ecology & Evolution, vol.18, issue.2, pp.70-74, 2003.
DOI : 10.1016/S0169-5347(02)00041-1

J. Van-campenhout, S. Derycke, T. Moens, and A. Vanreusel, Differences in life-histories refute ecological equivalence of cryptic species and provide clues to the origin of bathyal Halomon hystera (Nematoda), 2014.

, PLoS One, vol.9, p.111889

A. P. Vogler and M. T. Monaghan, Recent advances in DNA taxonomy, Journal of Zoological Systematics and Evolutionary Research, vol.213, issue.1, pp.1-10, 2006.
DOI : 10.1016/S0169-5347(02)00040-X

Z. D. Wang, Y. S. Guo, X. M. Liu, Y. B. Fan, and C. W. Liu, DNA barcoding South China Sea fishes, Mitochondrial DNA, vol.97, issue.5, pp.405-410, 2012.
DOI : 10.1098/rstb.2005.1716

R. D. Ward, R. Hanner, and P. N. Hebert, The campaign to DNA barcode all fishes, FISH-BOL, Journal of Fish Biology, vol.57, issue.Suppl. B, pp.329-356, 2009.
DOI : 10.3989/scimar.2006.70s27

R. D. Ward, B. H. Holmes, W. T. White, and P. R. Last, DNA barcoding Australasian chondrichthyans: results and potential uses in conservation, Marine and Freshwater Research, vol.59, issue.1, pp.57-71, 2008.
DOI : 10.1071/MF07148

W. T. White and P. R. Last, A review of the taxonomy of chondrichthyan fishes: a modern perspective, Journal of Fish Biology, vol.59, issue.5, pp.901-917, 2012.
DOI : 10.1071/MF07148

D. J. Woodland and R. C. Anderson, <p><strong>Description of a new species of rabbitfish (Perciformes: Siganidae) from southern India, Sri Lanka and the Maldives</strong></p>, Zootaxa, vol.3811, issue.1, pp.129-136, 2014.
DOI : 10.11646/zootaxa.3811.1.8

N. Yagishita, K. Furumitsu, and A. Yamaguchi, Molecular Evidence for the Taxonomic Status of an Undescribed Species of Dasyatis (Chondrichthyes: Dasyatidae) from Japan, Species Diversity, vol.14, issue.3, pp.157-164, 2009.
DOI : 10.12782/specdiv.14.157

T. S. Zemlak, R. D. Ward, A. D. Connell, B. H. Holmes, and P. N. Hebert, DNA barcoding reveals overlooked marine fishes, Molecular Ecology Resources, vol.17, issue.9, pp.237-242, 2009.
DOI : 10.1111/j.1755-0998.2009.02649.x