Genetic analysis of Thailand hantavirus in Bandicota indica trapped in Thailand

Jean-Pierre Hugot 1, 2, * Angelina Plyusnina 3 Vincent Herbreteau 2 Kirill Nemirov 4 Juha Laakkonen 5 Ake Lundkvist 4 Yupin Suputtamongkol 6 Heikki Henttonen 5 Alexander Plyusnin 3, 4
* Corresponding author
1 Origine, structure et évolution de la biodiversité
2 IRD UR178
3 Department of Virology, Haartman Institute
4 Swedish Institute for Infectious Disease Control
5 Finnish Forest Research Institute, Vantaa Research Unit
6 Siriraj Hospital, Mahidol University
Abstract : Sixty one tissue samples from several rodent species trapped in five provinces of Thailand were examined for the presence of hantaviral markers by enzyme-immunoassay and immunoblotting. Four samples, all from the great bandicoot rat Bandicota indica, were confirmed positive for the hantaviral N-antigen. Two of them were trapped in Nakhon Pathom province, the other two in Nakhon Ratchasima province, approximately 250 km from the other trapping site. When analysed by RT-nested PCR, all four rodents were found positive for the hantaviral S- and M-segment nucleotide sequences. Genetic analysis revealed that the four newly described wild-type strains belong to Thailand hantavirus. On the phylogenetic trees they formed a well-supported cluster within the group of Murinae-associated hantaviruses and shared a recent common ancestor with Seoul virus.
Mots-clés : VIRUS RAT PHRAE SAKHON NAKHON NAKHON RATCHASIMA THAILANDE TECHNIQUE RT PCR ENZYME PHYLOGENIE ANALYSE GENETIQUE ETUDE COMPARATIVE IMMUNOLOGIE
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Jean-Pierre Hugot, Angelina Plyusnina, Vincent Herbreteau, Kirill Nemirov, Juha Laakkonen, et al.. Genetic analysis of Thailand hantavirus in Bandicota indica trapped in Thailand. Virology Journal, BioMed Central, 2006, 3, pp.NIL_1-NIL_9. ⟨10.1186/1743-422X-3-72⟩. ⟨ird-00380483⟩

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